@article{buchta_jfm2022,

title = {Assimilation of wall-pressure measurements in high-speed flow over a cone},

author = {David A. Buchta and Stuart J. Laurence and Tamer A. Zaki},

doi = {10.1017/jfm.2022.668},

year  = {2022},

date = {2022-01-01},

journal = {Journal of Fluid Mechanics},

volume = {947},

pages = {R2},

publisher = {Cambridge University Press},

keywords = {Boundary layers, Data assimilation, Hypersonic, Stability, Transition},

pubstate = {published},

tppubtype = {article}

}

@article{ghanash_prf2021,

title = {Large eddy simulation of transitional channel flow using a machine learning classifier to distinguish laminar and turbulent regions},

author = {Ghanesh Narasimhan and Charles Meneveau and Tamer A. Zaki},

url = {https://link.aps.org/doi/10.1103/PhysRevFluids.6.074608},

doi = {10.1103/PhysRevFluids.6.074608},

year  = {2021},

date = {2021-07-01},

journal = {Phys. Rev. Fluids},

volume = {6},

issue = {7},

pages = {074608},

publisher = {American Physical Society},

keywords = {Channel, LES, Transition},

pubstate = {published},

tppubtype = {article}

}

@article{jahanbakhshi_jfm2021,

title = {Optimal heat flux for delaying transition to turbulence in a high-speed boundary layer},

author = {Reza Jahanbakhshi and Tamer A. Zaki},

doi = {10.1017/jfm.2021.210},

year  = {2021},

date = {2021-01-01},

journal = {Journal of Fluid Mechanics},

volume = {916},

pages = {A46},

publisher = {Cambridge University Press},

keywords = {Hypersonic, Roughness, Transition},

pubstate = {published},

tppubtype = {article}

}

@article{Wu3461,

title = {High-Reynolds-number fractal signature of nascent turbulence during transition},

author = {Zhao Wu and Tamer A Zaki and Charles Meneveau},

url = {https://www.pnas.org/content/117/7/3461},

doi = {10.1073/pnas.1916636117},

issn = {0027-8424},

year  = {2020},

date = {2020-01-01},

journal = {Proceedings of the National Academy of Sciences},

volume = {117},

number = {7},

pages = {3461--3468},

publisher = {National Academy of Sciences},

keywords = {Bypass, Conditional Sampling, Freestream Turbulence, Machine Learning, Spots, T/NT interface, Transition, Turbulence},

pubstate = {published},

tppubtype = {article}

}

@article{marxen_jfm2019,

title = {Turbulence in intermittent transitional boundary layers and in turbulence spots},

author = {O Marxen and T A Zaki},

url = {https://engineering.jhu.edu/zaki/wp-content/uploads/2018/12/Marxen_JFM_2019.pdf},

year  = {2019},

date = {2019-01-01},

journal = {Journal of Fluid Mechanics},

volume = {860},

pages = {350-383},

keywords = {Bypass, Conditional Sampling, Freestream Turbulence, Klebanoff, Streaks, Transition},

pubstate = {published},

tppubtype = {article}

}

@article{wu_prf2019,

title = {Application of a self-organizing map to identify the turbulent-boundary-layer interface in a transitional flow},

author = {Zhao Wu and Jin Lee and Charles Meneveau and Tamer Zaki},

url = {https://link.aps.org/doi/10.1103/PhysRevFluids.4.023902},

doi = {10.1103/PhysRevFluids.4.023902},

year  = {2019},

date = {2019-01-01},

journal = {Phys. Rev. Fluids},

volume = {4},

pages = {023902},

publisher = {American Physical Society},

keywords = {Bypass, Machine Learning, Spots, T/NT interface, Transition, Turbulence},

pubstate = {published},

tppubtype = {article}

}

@article{wangB_jfm2019,

title = {Low-frequency selectivity in flat-plate boundary layer with elliptic leading edge},

author = {Bofu Wang and Xuerui Mao and Tamer A Zaki},

doi = {10.1017/jfm.2019.91},

year  = {2019},

date = {2019-01-01},

journal = {Journal of Fluid Mechanics},

volume = {866},

pages = {239--262},

publisher = {Cambridge University Press},

keywords = {Adjoint, Bypass, Optimization, Streaks, Transition},

pubstate = {published},

tppubtype = {article}

}

@article{jahanbakhshi_jfm2019,

title = {Nonlinearly most dangerous disturbance for high-speed boundary-layer transition},

author = {Reza Jahanbakhshi and Tamer A Zaki},

doi = {10.1017/jfm.2019.527},

year  = {2019},

date = {2019-01-01},

journal = {Journal of Fluid Mechanics},

volume = {876},

pages = {87--121},

publisher = {Cambridge University Press},

keywords = {Hypersonic, Optimization, Transition},

pubstate = {published},

tppubtype = {article}

}

@article{park_jfm2019,

title = {Sensitivity of high-speed boundary-layer stability to base-flow distortion},

author = {J Park and T A Zaki},

url = {https://engineering.jhu.edu/zaki/wp-content/uploads/2018/12/Park_JFM_2019.pdf},

year  = {2019},

date = {2019-01-01},

journal = {Journal of Fluid Mechanics},

volume = {859},

pages = {476-515},

keywords = {Adjoint, Hypersonic, Instability, Sensitivity, Stability, Transition},

pubstate = {published},

tppubtype = {article}

}

@article{lee_cf2018,

title = {Detection algorithm for turbulent interfaces and large-scale structures in intermittent flows},

author = {J Lee and T A Zaki},

url = {https://engineering.jhu.edu/zaki/wp-content/uploads/2018/12/Lee_CF_2018.pdf},

year  = {2018},

date = {2018-01-01},

journal = {Computers and Fluids},

volume = {175},

pages = {142-158},

keywords = {Bypass, Conditional Sampling, Freestream Turbulence, Klebanoff, Streaks, Transition},

pubstate = {published},

tppubtype = {article}

}

@article{bose_prf2018,

title = {Instability waves and transition in adverse-pressure-gradient boundary layers},

author = {R Bose and T A Zaki and P A Durbin},

doi = {https://doi.org/10.1103/PhysRevFluids.3.053904},

year  = {2018},

date = {2018-01-01},

journal = {Physical Review fluids},

volume = {3},

number = {5},

pages = {053904},

keywords = {Bypass, Instability, Klebanoff, Shear, Streaks, Tollmien-Schichting, Transition},

pubstate = {published},

tppubtype = {article}

}

@article{sjlee_jfm2017,

title = {Simulations of natural transition in viscoelastic channel flow},

author = {S J Lee and T A Zaki},

url = {https://engineering.jhu.edu/zaki/wp-content/uploads/2018/12/SJLee_JFM_2017.pdf},

year  = {2017},

date = {2017-01-01},

journal = {Journal of Fluid Mechanics},

volume = {820},

pages = {232--262},

keywords = {Channel, Drag, Polymer, Shear, Transition, Viscoelastic},

pubstate = {published},

tppubtype = {article}

}

@article{mao_jfm2017,

title = {Transition induced by linear and nonlinear perturbation growth in flow past a blade},

author = {Xuerui Mao and Tamer A Zaki and Spencer J Sherwin and Hugh Blackburn},

year  = {2017},

date = {2017-01-01},

journal = {Journal of Fluid Mechanics},

volume = {820},

pages = {604--632},

keywords = {Compressor, Direct, Floquet, Inner, Instability, Klebanoff, Outer, Pressure Gradient, Separation, Stability, Tollmien-Schichting, Transition},

pubstate = {published},

tppubtype = {article}

}

@article{bianco_prf2017,

title = {Streak instability in viscoelastic Couette flow},

author = {Luca Biancofiore and Luca Brandt and Tamer Zaki},

url = {https://engineering.jhu.edu/zaki/wp-content/uploads/2018/12/Biancofiore_PRF_2017.pdf},

year  = {2017},

date = {2017-01-01},

journal = {Physical Review fluids},

volume = {2},

number = {043304},

keywords = {Couette, Polymer, Stability, Streaks, Transition, Viscoelastic},

pubstate = {published},

tppubtype = {article}

}

@article{hack_jfm2016,

title = {Data-enabled prediction of streak breakdown in pressure-gradient boundary layers.},

author = {Mario J P Hack and Tamer A Zaki},

url = {https://engineering.jhu.edu/zaki/wp-content/uploads/2018/12/Hack_JFM2016.pdf},

year  = {2016},

date = {2016-01-01},

journal = {Journal of Fluid Mechanics},

volume = {801},

pages = {43-64},

keywords = {Bypass, Inner, Instability, Klebanoff, Machine Learning, Neural Networks, Outer, Streaks, Transition},

pubstate = {published},

tppubtype = {article}

}

@article{Trevelyan_pre2016,

title = {Wavy vortices in molecular dynamics simulation of Taylor-Couette flow.},

author = {David J Trevelyan and Tamer A Zaki},

year  = {2016},

date = {2016-01-01},

journal = {Physical Review E},

volume = {93},

number = {043107},

keywords = {Molecular Dynamics, Taylor-Couette, Transition},

pubstate = {published},

tppubtype = {article}

}

@article{rocco_ast2015,

title = {Floquet and transient growth stability analysis of a flow through a compressor passage},

author = {Gabriele Rocco and Tamer A Zaki and Xuerui Mao and Hugh Blackburn and Spencer J Sherwin},

url = {https://engineering.jhu.edu/zaki/wp-content/uploads/2018/12/Rocco_AST_2015.pdf},

year  = {2015},

date = {2015-01-01},

journal = {Aerospace Science and Technology},

volume = {44},

pages = {116-124},

keywords = {Compressor, Direct, Floquet, Inner, Instability, Klebanoff, Outer, Pressure Gradient, Separation, Stability, Tollmien-Schichting, Transition},

pubstate = {published},

tppubtype = {article}

}

@article{hack_jfm2015,

title = {Modal and nonmodal stability of boundary layers forced by spanwise wall oscillations},

author = {Mario J P Hack and Tamer A Zaki},

url = {https://engineering.jhu.edu/zaki/wp-content/uploads/2018/12/Hack_JFM_2015.pdf},

year  = {2015},

date = {2015-01-01},

journal = {J. Fluid Mechanics},

volume = {778},

pages = {389-427},

keywords = {Bypass, Floquet, Instability, Non-modal, Stability, Streaks, Transition, Wall Oscillation},

pubstate = {published},

tppubtype = {article}

}

@article{jung_jfm2015,

title = {The effect of a low-viscosity near-wall film on bypass transition in boundary layers},

author = {Seo Yoon Jung and Tamer A Zaki},

url = {https://engineering.jhu.edu/zaki/wp-content/uploads/2018/12/Jung_JFM_2015.pdf},

year  = {2015},

date = {2015-01-01},

journal = {J. Fluid Mechanics},

volume = {772},

pages = {330 - 360},

keywords = {Bypass, Drag, Instability, Interface, Klebanoff, Streaks, Transition, Two-Fluid},

pubstate = {published},

tppubtype = {article}

}

@article{hack_jfm2014b,

title = {The influence of harmonic wall motion on transitional boundary layers},

author = {Mario J P Hack and Tamer A Zaki},

url = {https://engineering.jhu.edu/zaki/wp-content/uploads/2018/12/Hack_JFM_2014b.pdf},

year  = {2014},

date = {2014-01-01},

journal = {Journal of Fluid Mechanics},

volume = {760},

pages = {63 -- 94},

keywords = {Bypass, Streaks, Transition, Wall Oscillation},

pubstate = {published},

tppubtype = {article}

}

@article{agarwal_jfm2014,

title = {Linear and non-linear evolution of a localized disturbance in polymeric channel flow},

author = {Akshat Agarwal and Luca Brandt and Tamer A Zaki},

url = {https://engineering.jhu.edu/zaki/wp-content/uploads/2018/12/Agarwal_JFM_2014.pdf},

year  = {2014},

date = {2014-01-01},

journal = {Journal of Fluid Mechanics},

volume = {760},

pages = {278 -- 303},

keywords = {Channel, Polymer, Transition, Viscoelastic},

pubstate = {published},

tppubtype = {article}

}

@article{hack_jfm2014a,

title = {Streak instabilities in boundary layers beneath free-stream turbulence},

author = {Mario J P Hack and Tamer A Zaki},

url = {https://engineering.jhu.edu/zaki/wp-content/uploads/2018/12/Hack_JFM_2014.pdf},

year  = {2014},

date = {2014-01-01},

journal = {Journal of Fluid Mechanics},

volume = {741},

pages = {280-315},

keywords = {Bypass, Inner, Instability, Klebanoff, Outer, Streaks, Transition},

pubstate = {published},

tppubtype = {article}

}

@article{wissink_ftc2014,

title = {The Effect of wake turbulence intensity on transition in a compressor cascade},

author = {Jan G Wissink and Tamer A Zaki and Wolfgang Rodi and Paul A Durbin},

url = {https://engineering.jhu.edu/zaki/wp-content/uploads/2018/12/Wissink_FTC_2014.pdf},

year  = {2014},

date = {2014-01-01},

journal = {Flow, Turbulence & Combustion},

volume = {93},

number = {4},

pages = {555 - 576},

keywords = {Bypass, Compressor, Pressure Gradient, Separation, Streaks, Transition, Wakes},

pubstate = {published},

tppubtype = {article}

}

@article{nolan_jfm2013,

title = {Conditional sampling of transitional boundary layers in pressure gradients},

author = {Kevin P Nolan and Tamer A Zaki},

url = {https://engineering.jhu.edu/zaki/wp-content/uploads/2018/12/Nolan_JFM_2013_sm.pdf},

year  = {2013},

date = {2013-01-01},

journal = {Journal of Fluid Mechanics},

volume = {728},

pages = {306-339},

keywords = {Bypass, Conditional Sampling, Freestream Turbulence, Klebanoff, Streaks, Transition},

pubstate = {published},

tppubtype = {article}

}

@article{zaki_ftc2013,

title = {From Streaks to Spots and on to Turbulence: Exploring the Dynamics of Boundary Layer Transition},

author = {Tamer A Zaki},

url = {https://engineering.jhu.edu/zaki/wp-content/uploads/2018/12/Zaki_FTC_2013.pdf},

year  = {2013},

date = {2013-01-01},

journal = {Flow Turbulence and Combustion},

volume = {91},

number = {3},

pages = {451-473},

keywords = {Bypass, Conditional Sampling, Continuous Spectrum, Inner, Instability, Klebanoff, Outer, Streaks, Transition},

pubstate = {published},

tppubtype = {article}

}

@article{rehill_asme2012,

title = {Identifying Turbulent Spots in Transitional Boundary Layers},

author = {Brendan Rehill and Ed J Walsh and Luca Brandt and Philipp Schlatter and Tamer A Zaki and Donald M McEligot},

doi = {http://dx.doi.org/10.1115/1.4006395},

year  = {2012},

date = {2012-01-01},

journal = {Journal of Turbomachinery-Transactions of the ASME},

volume = {135 (1)},

number = {011019},

keywords = {Bypass, Shear, Spots, Transition},

pubstate = {published},

tppubtype = {article}

}

@article{jones_ijc2011,

title = {Flow estimation of boundary layers using DNS-based wall shear information},

author = {Bryn L Jones and Eric C Kerrigan and Jonathan F Morrison and Tamer A Zaki},

url = {https://engineering.jhu.edu/zaki/wp-content/uploads/2018/12/Jones_IJC_2011.pdf},

year  = {2011},

date = {2011-01-01},

journal = {International Journal of Control},

volume = {84},

number = {8},

pages = {1310-1325},

keywords = {Bypass, Streaks, Transition},

pubstate = {published},

tppubtype = {article}

}

@article{vaughan_jfm2011,

title = {Stability of zero-pressure-gradient boundary layer distorted by unsteady Klebanoff streaks},

author = {Nicholas J Vaughan and Tamer A Zaki},

url = {https://engineering.jhu.edu/zaki/wp-content/uploads/2018/12/Vaughan_JFM_2011.pdf},

year  = {2011},

date = {2011-01-01},

journal = {Journal of Fluid Mechanics},

volume = {681},

pages = {116-153},

keywords = {Bypass, Floquet, Inner, Instability, Klebanoff, Outer, Streaks, Transition},

pubstate = {published},

tppubtype = {article}

}

@article{naguib_pof2010,

title = {On the relationship between the wall-shear-stress and transient-growth disturbances in a laminar boundary layer},

author = {Ahmed M Naguib and Jonathan F Morrison and Tamer A Zaki},

url = {https://engineering.jhu.edu/zaki/wp-content/uploads/2018/12/Naguib_PoF_2010.pdf},

year  = {2010},

date = {2010-01-01},

journal = {Physics of Fluids},

volume = {22},

number = {054103},

keywords = {Bypass, Shear, Streaks, Transition},

pubstate = {published},

tppubtype = {article}

}

@article{zaki_jfm2010,

title = {Direct numerical simulations of transition in a compressor cascade: the influence of free-stream turbulence},

author = {Tamer A Zaki and Jan G Wissink and Wolfgang Rodi and Paul A Durbin},

url = {https://engineering.jhu.edu/zaki/wp-content/uploads/2018/12/Zaki_JFM_2010.pdf},

year  = {2010},

date = {2010-01-01},

journal = {Journal of Fluid Mechanics},

volume = {665},

pages = {57-98},

keywords = {Bypass, Compressor, Freestream Turbulence, Pressure Gradient, Separation, Streaks, Transition},

pubstate = {published},

tppubtype = {article}

}

@article{durbin_ijhff2009,

title = {Interaction of discrete and continuous boundary layer modes to cause transition},

author = {Paul A Durbin and Tamer A Zaki and Yang Liu},

doi = {http://dx.doi.org/10.1016/j.ijheatfluidflow.2008.12.008},

year  = {2009},

date = {2009-01-01},

journal = {International Journal of Heat and Fluid Flow},

volume = {30},

number = {3},

pages = {403-410},

keywords = {Bypass, Instability, Klebanoff, Shear, Streaks, Tollmien-Schichting, Transition},

pubstate = {published},

tppubtype = {article}

}

@article{zaki_ftc2009,

title = {Direct Computations of Boundary Layers Distorted by Migrating Wakes in a Linear Compressor Cascade},

author = {Tamer A Zaki and Jan G Wissink and Paul A Durbin and Wolfgang Rodi},

url = {https://engineering.jhu.edu/zaki/wp-content/uploads/2018/12/Zaki_FTC_2009.pdf},

year  = {2009},

date = {2009-01-01},

journal = {Flow Turbulence and Combustion},

volume = {83},

number = {3},

pages = {307-322},

keywords = {Bypass, Compressor, Pressure Gradient, Separation, Streaks, Transition, Wakes},

pubstate = {published},

tppubtype = {article}

}

@article{liu_jfm2008,

title = {Boundary-layer transition by interaction of discrete and continuous modes},

author = {Yang Liu and Tamer A Zaki and Paul A Durbin},

url = {https://engineering.jhu.edu/zaki/wp-content/uploads/2018/12/Liu_JFM_2008.pdf},

year  = {2008},

date = {2008-01-01},

journal = {Journal of Fluid Mechanics},

volume = {604},

pages = {199-233},

keywords = {Bypass, Instability, Klebanoff, Shear, Streaks, Tollmien-Schichting, Transition},

pubstate = {published},

tppubtype = {article}

}

@article{liu_pof2008,

title = {Floquet analysis of secondary instability of boundary layers distorted by Klebanoff streaks and Tollmien-Schlichting waves},

author = {Yang Liu and Tamer A Zaki and Paul A Durbin},

url = {https://engineering.jhu.edu/zaki/wp-content/uploads/2018/12/Liu_PoF_2008.pdf},

year  = {2008},

date = {2008-01-01},

journal = {Physics of Fluids},

volume = {20},

number = {124102},

keywords = {Bypass, Floquet, Instability, Klebanoff, Shear, Streaks, Tollmien-Schichting, Transition},

pubstate = {published},

tppubtype = {article}

}

@article{zaki_jfm2006,

title = {Continuous mode transition and the effects of pressure gradient},

author = {Tamer A Zaki and Paul A Durbin},

url = {https://engineering.jhu.edu/zaki/wp-content/uploads/2018/12/Zaki_JFM_2006.pdf},

year  = {2006},

date = {2006-01-01},

journal = {Journal of Fluid Mechanics},

volume = {563},

pages = {357-388},

keywords = {Bypass, Instability, Klebanoff, Pressure Gradient, Shear, Streaks, Transition},

pubstate = {published},

tppubtype = {article}

}

@article{zaki_jfm2005,

title = {Mode interaction and the bypass route to transition},

author = {Tamer A Zaki and Paul A Durbin},

url = {https://engineering.jhu.edu/zaki/wp-content/uploads/2018/12/Zaki_JFM_2005.pdf},

year  = {2005},

date = {2005-01-01},

journal = {Journal of Fluid Mechanics},

volume = {531},

pages = {85-111},

keywords = {Bypass, Instability, Klebanoff, Shear, Streaks, Transition},

pubstate = {published},

tppubtype = {article}

}