Ardekani, Siamak

Assistant Research Professor
Biomedical Engineering

Clark Hall 320A
(410) 516-5424
sardekani@jhu.edu

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About

Education
  • Ph.D. 2006, Univ of California Los Angeles
  • Ph.D. 2003, Univ of California Los Angeles
Experience
  • 2016 - Present:  LECTURER, WSE Engineering for Professionals (EP)
  • 2016 - Present:  Joint, SOM Medicine

Publications

Journal Articles
  • Ardekani S, Jain S, Sanzi A, Corona-Villalobos CP, Abraham TP, Abraham MR, Zimmerman SL, Wu KC, Winslow RL, Miller MI, Younes L (2016).  Shape analysis of hypertrophic and hypertensive heart disease using MRI-based 3D surface models of left ventricular geometry.  Medical Image Analysis.  29.
  • Ardekani S, Gunter G, Jain S, Weiss RG, Miller M, Younes L (2014).  Estimating dense cardiac 3D motion using sparse 2D tagged MRI cross-sections..  Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual Conference.  2014.  5101-4.
  • Horská A, Nidecker A, Intrapiromkul J, Tannazi F, Ardekani S, Brant LJ, Wharam, Jr M, Mahone EM (2014).  Diffusion tensor imaging of deep gray matter in children treated for brain malignancies..  Child's nervous system : ChNS : official journal of the International Society for Pediatric Neurosurgery.  30(4).  631-8.
  • Horská A, Nidecker A, Intrapiromkul J, Tannazi F, Ardekani S, Brant LJ, Wharam M, Mahone EM (2014).  Diffusion tensor imaging of deep gray matter in children treated for brain malignancies.  Child's Nervous System.  30(4).
  • Ardekani S, Gunter G, Jain S, Weiss RG, Miller MI, Younes L (2014).  Estimating dense cardiac 3D motion using sparse 2D tagged MRI cross-sections.  2014 36th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBC 2014.
  • Steinert-Threlkeld S, Ardekani S, Mejino JLV, Detwiler LT, Brinkley JF, Halle M, Kikinis R, Winslow RL, Miller MI, Ratnanather JT (2012).  Ontological labels for automated location of anatomical shape differences.  Journal of Biomedical Informatics.  45(3).
  • Ardekani S, Jain A, Jain S, Abraham TP, Abraham MR, Zimmerman S, Winslow RL, Miller MI, Younes L (2012).  Matching sparse sets of cardiac image cross-sections using large deformation diffeomorphic metric mapping algorithm.  Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics).  7085 LNCS.
  • Steinert-Threlkeld S, Ardekani S, Mejinoz JLV, Detwilerz LT, Brinkleyz JF, Halle M, Kikinis R, Winslowy RL, Miller MI, Ratnanather JT (2011).  Ontological labels for automated location of left ventricular remodeling.  Proceedings - 5th IEEE International Conference on Semantic Computing, ICSC 2011.
  • Tameem HZ, Ardekani S, Seeger L, Thompson P, Sinha US (2011).  Initial results on development and application of statistical atlas of femoral cartilage in osteoarthritis to determine sex differences in structure: data from the Osteoarthritis Initiative..  Journal of magnetic resonance imaging : JMRI.  34(2).  372-83.
  • Ardekani S, Weiss RG, Lardo AC, George RT, Lima JAC, Wu KC, Miller MI, Winslow RL, Younes L (2009).  Cardiac motion analysis in ischemic and non-ischemic cardiomyopathy using parallel transport.  Proceedings - 2009 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI 2009.
  • Ardekani S, Weiss RG, Lardo AC, Miller M, Winslow RL, Younes L (2009).  Cardiac Motion Analysis in Ischemic and Non-Ischemic Cardiomyopathy Using Parallel Transport..  Proceedings / IEEE International Symposium on Biomedical Imaging: from nano to macro. IEEE International Symposium on Biomedical Imaging.  899.
  • Ardekani S, Weiss RG, Lardo AC, George RT, Lima JAC, Wu KC, Miller MI, Winslow RL, Younes L (2009).  Computational Method for Identifying and Quantifying Shape Features of Human Left Ventricular Remodeling.  Annals of Biomedical Engineering.  37(6).
  • Ardekani S, Weiss RG, Lardo AC, George RT, Lima JA, Wu KC, Miller M, Winslow RL, Younes L (2009).  Computational method for identifying and quantifying shape features of human left ventricular remodeling..  Annals of biomedical engineering.  37(6).  1043-54.
  • Ardekani S, Kumar A, Bartzokis G, Sinha U (2007).  Exploratory voxel-based analysis of diffusion indices and hemispheric asymmetry in normal aging..  Magnetic resonance imaging.  25(2).  154-67.
  • Bui AA, Morioka C, Dionisio JD, Johnson DB, Sinha U, Ardekani S, Taira RK, Aberle DR, El-Saden S, Kangarloo H (2007).  OpenSourcePACS: an extensible infrastructure for medical image management..  IEEE transactions on information technology in biomedicine : a publication of the IEEE Engineering in Medicine and Biology Society.  11(1).  94-109.
  • Ardekani S, Sinha U (2006).  Statistical representation of mean diffusivity and fractional anisotropy brain maps of normal subjects..  Journal of magnetic resonance imaging : JMRI.  24(6).  1243-51.
  • Ardekani S, Selva L, Sayre J, Sinha U (2006).  Quantitative metrics for evaluating parallel acquisition techniques in diffusion tensor imaging at 3 Tesla..  Investigative radiology.  41(11).  806-14.
  • Ardekani S, Sinha U (2005).  Geometric distortion correction of high-resolution 3 T diffusion tensor brain images..  Magnetic resonance in medicine : official journal of the Society of Magnetic Resonance in Medicine / Society of Magnetic Resonance in Medicine.  54(5).  1163-71.
  • Sinha U, Ardekani S (2004).  Parametric brain MR atlases: standardization for imaging informatics..  Studies in health technology and informatics.  107(Pt 2).  1374-8.
Book Chapters
  • Ardekani S, Jain A, Jain S, Abraham TP, Abraham MR, Zimmerman S, Winslow RL, Miller M, Younes L (2012).  Matching sparse sets of cardiac image cross-sections using large deformation diffeomorphic metric mapping algorithm.  Statistical Atlases and Computational Models of the Heart. Imaging and Modelling Challenges.  Springer Berlin Heidelberg.  234-243.
Conference Proceedings
  • Steinert-Threlkeld S, Ardekani S, Mejino J, Detwiler L, Brinkley J, Halle M, Kikinis R, Winslow R, Miller M, Ratnanather J  Ontological Labels for Automated Location of Left Ventricular Remodeling.  Fifth IEEE International Conference on Semantic Computing.
  • Steinert-Threlkeld S, Ardekani S, Mejino JL, Detwiler LT, Brinkley JF, Halle M, Kikinis R, Winslow RL, Miller M, Ratnanather J  Ontological Labels for Automated Location of Left Ventricular Remodeling.  Semantic Computing (ICSC), 2011 Fifth IEEE International Conference on.  572-573.
  • Winslow R, Saltz J, Foster I, Carr J, Ge Y, Miller M, Younes L, Geman D, Granite S, Kurc T, Post A, Madduri R, Ratnanather T, Larkin J, Ardekani S, Brown T, Kolasny A, Reynolds K, Shipway M  The CardioVascular Research Grid (CVRG) Project.  AMIA.  77-81.
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